Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913022.1_cds_XP_016463120.1_56272
CDS Infomation

[gene=LOC107786183] [db_xref=GeneID:107786183] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g34110 isoform X2] [protein_id=XP_016463120.1] [location=complement(join(6133..6169,6243..8068))] [gbkey=CDS]
Sequence

ATGCGAATCTTCTTCCTCATGTTTTTCTTCTTAATTAGACTGTCTTTCCAAGAAAATTTA
TTTACAAGCACGGAAAAGTCCGTCTTACTAAGTTTGAAACAGCACTGGAGCAATCCAGAG
ATCTTCCAGTCATGGGATTTGAAATATTCGCCATGTAGTTGGTCAGGAGTGTCATGTATG
AATGGCTTTGGCAGAGTCACACAGCTAGTTCTAGGAGGAAATAACATTACTGGAACAATT
CCATCAACAATATGTCAGCTCAAGAACCTTACCTTGATTGATCTCTCCAACAACAACATT
TTTGGAACTATACCAGTAAGCCTGATGGACTGCTCAAAGCTACAACACCTGGACTTATCC
AACAATTATTTGAGAGGCCAGATTCCAGGTGAGTTGTTTAGGATGGATAGATTAGCCAAT
TTGTATCTTAAAGGTAACATGTTTTCGGGTGAGATGCCAAAAGAAATATCAGCATCCCAA
CTGGAAAATCTTGATCTTTCTAGGAACTACTTGAACGGCTCGATCCCAGAAGAATTTGGG
AGCTTGAAAAAACTTGTGAAATTGGACCTGTCACATAATTCTCTAAGTGGTTCAATTACT
AATCAGTTGTTCCAGTTGCATCATTTGCGTCACTTGTTACTGAGTCATAACTACTTATCT
GGCGTGATACCTAATGCAATGGACTTGTTTAGTTTGTATAGTATGGATCTTTCTCATAAC
CAATTGAAAGGTTCTATACCAAAGAGATTTTGGGATTTACCTGGATTGCATGCTTTAGAT
TTGTCTTATAATCAATTATCAGGAGACATTTCTGAAAGTATAGAACATCTTTTGCCTAGT
AATACTTTAAGGCTTTGTTCCAACAAATTCTCAGGGAGAATTTCTGCTGAATTTGTGAAG
CTAACATATGAAGACAATTGCTTTGACAAGTCCAACCTTTGTTCTACATCCAAGAACTCC
TTCCCTGATTTACCAAGCTGCTCTTCTGGTGATAAGGTTCGAAAGTTTCTGAGAGAAAAA
CACTTGATTATCATAATTCCTGCTGTAGTTGTTGGAATAGCTATACAGTCAGTATGGATA
TTTTACATGGTCAGGAAGCATTGGTGGAAAAAAGACTGCATATCGATGCAATTAGTATGG
ATCTTTTCCTTGATCAGAAAGCCTTGGTGGAAAAAGAAGCAGAACATTGAAGAGGACTTG
AAGTTAATTTCATTTCACAAGTTGAGGGTAACTACGGAGGACATTATGTCTGGCTTGAAA
GACGAAAATGTGATAGGACATGGAGGATCAGGGAAGGTCTATCGAGATGTGATCGACCAA
ACAGGCGATACTTATGCTGTTAAAAGTATACGGCATGACAAAAGTTCAGGTGGAAAACTC
CCAAAGGATTTTTTAGCAGAAGTTCGAATACTTGGTAGCATTCGACATAAAAACATTGTC
AAGCTCTTTTGCTGCATCTTTAGCGCAGACAAAAACCTTCTAGTATATGAATACTTTGAG
AAACAAAGCCTGGACAAATGGCTTCACAGAAAGAGAAGAGCAGCCTCACCAGGTCAAAGT
AGTACCCCACCCTTGGATTGGCAAAAGAGATTAAAAATAGCCATTGGTGCAGCTCAAGGA
CTCTGCTATATGCACCATGATTGCACTCGGCCTATCATTCATAGAGACATTAAGTCCAGT
AATATCCTTCTAGACTCGGAATTCAATCCAAAAATAGCAGATTTTGGGCTAGCGAAAATG
CTAGCAAAGCACGATGATGATCCTGAGACAGCTTCTGCTATTGCTGGAACTTTTGGTTAC
ATTGCCCCTGGTACATTACAGTTCAAAGTATGCCTCTACATTCAAAGTGAATGTGAAGAC
TGA

Peptide Sequence

PEP ID

XP_016463120.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 isoform X2 [Nicotiana tabacum]
Sequence

MRIFFLMFFFLIRLSFQENLFTSTEKSVLLSLKQHWSNPEIFQSWDLKYSPCSWSGVSCM
NGFGRVTQLVLGGNNITGTIPSTICQLKNLTLIDLSNNNIFGTIPVSLMDCSKLQHLDLS
NNYLRGQIPGELFRMDRLANLYLKGNMFSGEMPKEISASQLENLDLSRNYLNGSIPEEFG
SLKKLVKLDLSHNSLSGSITNQLFQLHHLRHLLLSHNYLSGVIPNAMDLFSLYSMDLSHN
QLKGSIPKRFWDLPGLHALDLSYNQLSGDISESIEHLLPSNTLRLCSNKFSGRISAEFVK
LTYEDNCFDKSNLCSTSKNSFPDLPSCSSGDKVRKFLREKHLIIIIPAVVVGIAIQSVWI
FYMVRKHWWKKDCISMQLVWIFSLIRKPWWKKKQNIEEDLKLISFHKLRVTTEDIMSGLK
DENVIGHGGSGKVYRDVIDQTGDTYAVKSIRHDKSSGGKLPKDFLAEVRILGSIRHKNIV
KLFCCIFSADKNLLVYEYFEKQSLDKWLHRKRRAASPGQSSTPPLDWQKRLKIAIGAAQG
LCYMHHDCTRPIIHRDIKSSNILLDSEFNPKIADFGLAKMLAKHDDDPETASAIAGTFGY
IAPGTLQFKVCLYIQSECED

Transcript Sequence

Gene sequence data has not been registered.